Blackfynn Data Management

Importing, curating, and collaborating on scientific datasets using the Blackfynn Platform

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58 articles in this collection
Written by Kevin Jackson
Getting Started

Setting up Two Factor Authentication

How do I enable Two Factor Authentication
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Written by Kevin Jackson
Updated over a week ago

Signing up for an account

How do I sign up for a Blackfynn account?
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Updated over a week ago

Setting up your profile

How do I set up my Blackfynn account profile?
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Updated over a week ago

How to reset your password

I forgot my password, how do I reset it?
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Written by Kevin Jackson
Updated over a week ago

Getting Help

How do I contact the Blackfynn team for help?
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Written by Kevin Jackson
Updated over a week ago

Inviting Users to Blackfynn

How do I invite users to my Blackfynn organization?
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Written by Kevin Jackson
Updated over a week ago

Creating teams on the Blackfynn Platform

How you I create a team within my organization?
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Updated over a week ago

Download a sample dataset

Do you have any sample data to use with the tutorials?
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Written by Kevin Jackson
Updated over a week ago

Security and Compliance

What are Blackfynn's security and compliance practices?
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Written by Kevin Jackson
Updated over a week ago

Closing a Blackfynn account

I want to cancel my subscription, what happens to my account?
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Written by Kevin Jackson
Updated over a week ago

Blackfynn Data Rescue

How do I extract all my data from the Blackfynn platform?
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Written by Kevin Jackson
Updated over a week ago

Supported Browsers for Blackfynn Web Application

Which browsers does the Blackfynn platform support?
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Written by Kevin Jackson
Updated over a week ago
Importing and managing files

Uploading files to a dataset

How do I upload files to a dataset?
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Written by Kevin Jackson
Updated over a week ago

Moving and renaming files and folders

How do I move or rename files and folders on Blackfynn?
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Updated over a week ago

Downloading files and folders

How do I download files and folders on Blackfynn?
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Updated over a week ago

Associating files with metadata records

How do I link my file to metadata records on Blackfynn?
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Updated over a week ago

File Details Page

How can I see details about my files on Blackfynn?
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Written by Kevin Jackson
Updated over a week ago

Supported File Formats

What file formats does the Blackfynn Platform support?
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Written by Kevin Jackson
Updated over a week ago

Viewing Files

How do I view my files on Blackfynn?
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Updated over a week ago

Discussions in the Web Application

How do you create discussions in the Blackfynn viewers?
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Updated over a week ago

Time Series Viewer

Using the Blackfynn time series viewer for continuous and neural data.
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Updated over a week ago

The Digital Image Viewer

Viewing digital pathology slides on the blackfynn platform
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Updated over a week ago

Tabular Data Package Viewer

Viewing tabular datasets, such as CSV, in the Blackfynn platform
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Written by Kevin Jackson
Updated over a week ago

The Clinical Image Viewer

Viewing clinical imaging such as DICOM and NIFTI
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Updated over a week ago

Uploading data using the Blackfynn CLI

How do I upload data using programmatically using the Blackfynn Command Line Interface
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Written by Kevin Jackson
Updated over a week ago
Publishing Data

Overview of Data Publishing on Blackfynn

What is data publishing on Blackfynn?
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Written by Kevin Jackson
Updated over a week ago

Adding Publishers to your Blackfynn organization

How do I add publishers to my organization on Blackfynn?
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Updated over a week ago

Submitting datasets for publication on Blackfynn

How do I submit a dataset for publication on Blackfynn?
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Updated over a week ago

Reviewing and Accepting Datasets for Publication

How do you review and publish datasets on Blackfynn as a publisher?
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Updated over a week ago

Submitting a revision of a dataset for publication

What is the difference between submitting a new version of a dataset and creating a revision?
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Updated over a week ago

Accessing embargoed datasets

How do I find and access embargoed datasets on Blackfynn Discover?
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Written by Kevin Jackson
Updated over a week ago

Preventing files from being included during publishing

The Publish ignore list allows you to specify which files to ignore during publication
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Updated over a week ago

ORCID iDs on the Blackfynn platform

How do I link my ORCID iD to my Blackfynn profile?
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Written by Kevin Jackson
Updated over a week ago

Digital Object Identifiers (DOIs)

What is a DOI? How does my dataset get a DOI?
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Written by Kevin Jackson
Updated over a week ago

Common Dataset Licenses

Add licenses to your datasets to protect your work.
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Written by Kevin Jackson
Updated over a week ago

Markdown Guide

Tips for composing content using Markdown.
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Written by Kevin Jackson
Updated over a week ago